Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 1299923 1299950 28 2 [1] [1] 2 oppD murein tripeptide/oligopeptide ABC transporter ATP‑binding protein OppD

CTCGATGCGGAAGGTGAAACAATGTTGACCATCCCGGGTAATCCGCCAAACCTGCTGCGATTACCGAAAGGTTGCCCGTTCCAGCCACGTTGTC  >  NZ_CP009273/1299833‑1299926
                                                                                         |    
ctcGATGCGGAAGGTGAAACAATGTTGACCATCCCGGGTAATCCGCCAAACCTGCTGCGATTACCGAAAGGTTGCCCGTTCCAGCCACGt      <  1:291652/90‑1 (MQ=255)
    aTGCGGAAGGTGAAACAATGTTGACCATCCCGGGTAATCCGCCAAACCTGCTGCGATTACCGAAAGGTTGCCCGTTCCAGCCACGTTGTc  >  1:353508/1‑90 (MQ=255)
                                                                                         |    
CTCGATGCGGAAGGTGAAACAATGTTGACCATCCCGGGTAATCCGCCAAACCTGCTGCGATTACCGAAAGGTTGCCCGTTCCAGCCACGTTGTC  >  NZ_CP009273/1299833‑1299926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: