Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2102575	2102597	23	2 [1]	[1] 3	wzx	O16 family O‑antigen flippase

ACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCACTTGACTGAATAAAACCGGCAATTGCTATATCTGACTTTGTGTTCACAAAAATAAATGTTA  >  NZ_CP009273/2102485‑2102584                                                                                          |           acGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCACTTGACTGAATAAAACCGGCAATTGCTATATCTGACTTTGTGTTCACaaaa            >  1:174142/1‑90 (MQ=255)           gTGCAATAATTCCAGCAACCAGATTTGCACTTGACTGAATAAAACCGGCAATTGCTATATCTGACTTTGTGTTCACAAAAATAAATGTTa  >  1:269409/1‑90 (MQ=255)                                                                                          |           ACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCACTTGACTGAATAAAACCGGCAATTGCTATATCTGACTTTGTGTTCACAAAAATAAATGTTA  >  NZ_CP009273/2102485‑2102584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑