Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1188616	1188657	42	2 [1]	[1] 2	mnmA	tRNA 2‑thiouridine(34) synthase MnmA

GTCTTTTTTCTTCGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGC  >  NZ_CP009273/1188648‑1188747           |                                                                                          gTCTTTTTTCTTCGCGGTGCCCAGCCCAAGACCTTCAGCAATCTTACGCCCCTGCGG‑TTTTCCAGTTCGCCGACCGGGAACAGGCTTTgc           <  2:147418/90‑1 (MQ=255)           ttcGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGc  >  2:157257/1‑90 (MQ=255)           |                                                                                          GTCTTTTTTCTTCGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGC  >  NZ_CP009273/1188648‑1188747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑