Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1229742	1229779	38	2 [1]	[0] 2	nhaB	Na(+)/H(+) antiporter NhaB

GCGACAGCAGCATTTTGGAGCGAATGCTTAACAGCAAACGGGTAAATATGAACAGCAACAGCTGTTTCATAAAATAGATACCCGCCACCA  >  NZ_CP009273/1229780‑1229869 |                                                                                          gCGACAGCAGCATTTTGGAGCGAATGCTTAACAGCAAACGGGTAAATATGAACAGCAACAGCTGTTTCATAAAATAGATACCCGccacca  >  1:170344/1‑90 (MQ=255) gCGACAGCAGCATTTTGGAGCGAATGCTTAACAGCAAACGGGTAAATATGAACAGCAACAGCTGTTTCATAAAATAGATACCCGccacca  >  2:139196/1‑90 (MQ=255) |                                                                                          GCGACAGCAGCATTTTGGAGCGAATGCTTAACAGCAAACGGGTAAATATGAACAGCAACAGCTGTTTCATAAAATAGATACCCGCCACCA  >  NZ_CP009273/1229780‑1229869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑