Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1238774	1238794	21	2 [0]	[1] 2	emtA	membrane‑bound lytic murein transglycosylase EmtA

TCGATCCACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTA  >  NZ_CP009273/1238790‑1238884      |                                                                                          tCGATCCACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGc       <  2:121323/90‑1 (MQ=255)      ccACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTa  >  2:269878/1‑90 (MQ=255)      |                                                                                          TCGATCCACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTA  >  NZ_CP009273/1238790‑1238884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑