Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1663580	1663583	4	2 [1]	[0] 3	ynfL	LysR family transcriptional regulator

TGATGCAGCCTTTCAGCGCGAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTC  >  NZ_CP009273/1663584‑1663673 |                                                                                          tGATGCAGCCTTTCAGCGCGAGCGGCAGCGTCATCCACCATAGGCAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTc  <  2:467288/90‑1 (MQ=255) tGATGCAGCCTTTCAGCGCGAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTc  <  2:377098/90‑1 (MQ=255) tGATGCAGCCTTTCAGCGCGAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTc  <  2:387650/90‑1 (MQ=255) |                                                                                          TGATGCAGCCTTTCAGCGCGAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTC  >  NZ_CP009273/1663584‑1663673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑