Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1225839	1225872	34	2 [1]	[1] 3	[hlyE]	[hlyE]

TTCGCCTCTTTAAATATATAAATTGTAATGAAACTCCTGTTTTACAACTATTAATAAATTTTACTTCATCTAATTCATAGTTAGCCGGGC  >  NZ_CP009273/1225856‑1225945                  |                                                                         ttCGCCTCTTTAAATATATAAATTGTAATGAAACTCCTGTTTTACAACTATTAATAAATTTTACTTCATCTAATTCATAGTTAGCcgggc  >  2:32971/1‑90 (MQ=255)                  ataAATTGTAATGAAACTCCTGTTTTACAACTATtaataa                                   >  1:310778/1‑40 (MQ=255)                  ataAATTGTAATGAAACTCCTGTTTTACAACTATtaataa                                   <  2:310778/40‑1 (MQ=255)                  |                                                                         TTCGCCTCTTTAAATATATAAATTGTAATGAAACTCCTGTTTTACAACTATTAATAAATTTTACTTCATCTAATTCATAGTTAGCCGGGC  >  NZ_CP009273/1225856‑1225945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑