Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3763181	3763183	3	2 [0]	[0] 2	BW25113_RS26240/yibH	Imm57 family immunity protein/HlyD family secretion protein

GTGCATCGATGAATGATAACTTAATTTTATTTAAAAATATATTAATAACTCAC  >  NZ_CP009273/3763128‑3763180                                                     | gTGCATCGATGAATGATAACTTAATTTTATTTAAAAATATATTAATAactcac  >  1:389188/1‑53 (MQ=255) gTGCATCGATGAATGATAACTTAATTTTATTTAAAAATATATTAATAactcac  <  2:389188/53‑1 (MQ=255)                                                     | GTGCATCGATGAATGATAACTTAATTTTATTTAAAAATATATTAATAACTCAC  >  NZ_CP009273/3763128‑3763180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑