| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,484,883 | T→G | T183P (ACG→CCG) | oxc ← | oxalyl‑CoA decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,484,883 | 0 | T | G | 100.0% | 62.3 / NA | 18 | T183P (ACG→CCG) | oxc | oxalyl‑CoA decarboxylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (9/9); total (9/9) | |||||||||||
TGCTAAAAGCGAAATTGCGCTAGTGACTGACTTCGGGCATGGCAATAATGCTGGCGACGGATTTTCAACTTTAACAATCGTGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGCGACCCGATACAG > NZ_CP009273/2484803‑2484969 | tGCTAAAAGCGAAATTGCGCTAGTGACTGACTTCGGGCATGGCAATAATGCTGGCGACGGATTTTCAACTTTAACAATCGGGGTTAACGc > 1:190122/1‑90 (MQ=255)tGCTAAAAGCGAAATTGCGCTAGTGACTGACTTCGGGCATGGCAATAATGCTGGCGACGGATTTTCAACTTTAACAATCGGGGTTAACGc > 1:488551/1‑90 (MQ=255) taatGCTGGCGACGGATTTTCAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATc > 1:332006/1‑90 (MQ=255) gCTGGCGACGGATTTTCAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGa > 1:158502/1‑90 (MQ=255) gCTGGCGACGGATTTTCAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGa > 2:23035/1‑90 (MQ=255) cTGGCGACGGATTTTCAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGAt < 1:197228/90‑1 (MQ=255) tGGCGACGGATTTTCAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATa > 1:420246/1‑90 (MQ=255) ggCGACGGATTTTCAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATaa > 1:370811/1‑90 (MQ=255) ggCGACGGATTTTCAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATaa > 2:364943/1‑90 (MQ=255) cGACGGATTTTCAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAAc < 2:190122/90‑1 (MQ=255) cAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGc < 2:370811/90‑1 (MQ=255) cAACTTTAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGc < 2:420246/90‑1 (MQ=255) ttAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGCGAccc > 1:81602/1‑90 (MQ=255) ttAACAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGCGAccc < 2:2278/90‑1 (MQ=255) aaCAATCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGCGACCCGa < 1:452007/90‑1 (MQ=255) tCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGCGACCCGATACag < 1:192521/90‑1 (MQ=255) tCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGCGACCCGATACag < 1:221098/90‑1 (MQ=255) tCGGGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGCGACCCGATACag < 2:380059/90‑1 (MQ=255) | TGCTAAAAGCGAAATTGCGCTAGTGACTGACTTCGGGCATGGCAATAATGCTGGCGACGGATTTTCAACTTTAACAATCGTGGTTAACGCTTCGTCTTTTTCCATCGTCGCGGCCAGGACATTTGCTGGCAAATCAAGATAAACTCCGCCAGGGCGACCCGATACAG > NZ_CP009273/2484803‑2484969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |