| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,768,477 | T→C | intergenic (+97/‑514) | BW25113_RS13770 → / → BW25113_RS24190 | hypothetical protein/DUF905 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,768,477 | 0 | T | C | 100.0% | 47.3 / NA | 14 | intergenic (+97/‑514) | BW25113_RS13770/BW25113_RS24190 | hypothetical protein/DUF905 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (7/7); total (7/7) | |||||||||||
AATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAA > NZ_CP009273/2768394‑2768560 | aaTTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATAcc > 1:188835/1‑90 (MQ=255)aaTTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATAcc < 1:190671/90‑1 (MQ=255) ccTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATACCTGCTTTaa < 2:248838/90‑1 (MQ=255) cTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATACCTGCTTTaaa > 1:264288/1‑90 (MQ=255) cTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATACCTGCTTTAAAGTGGCGtttt < 1:446519/90‑1 (MQ=255) attaAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATACCTGCTTTAAAGTGGCGTTTTTGTCGt < 2:264288/90‑1 (MQ=255) aaTATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTAccc < 2:188835/90‑1 (MQ=255) cTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCt < 1:410883/90‑1 (MQ=255) aaGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTa > 1:520813/1‑79 (MQ=255) aaGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTa < 2:520813/79‑1 (MQ=255) aaGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACCCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATAtttt > 1:72575/1‑90 (MQ=255) ggCTTGAGCGTGAAGCGGACACCCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAg > 2:160206/1‑90 (MQ=255) ggACACCCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGaaa > 1:364366/1‑90 (MQ=255) ggACACCCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGaaa > 2:418404/1‑90 (MQ=255) | AATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAA > NZ_CP009273/2768394‑2768560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |