| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,971,768 | A→G | E295G (GAA→GGA) | rffT → | TDP‑N‑acetylfucosamine:lipid II N‑acetylfucosaminyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,971,768 | 0 | A | G | 100.0% | 82.8 / NA | 24 | E295G (GAA→GGA) | rffT | TDP‑N‑acetylfucosamine:lipid II N‑acetylfucosaminyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/15); total (9/15) | |||||||||||
GGTTACTTTATTTTTGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGAAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGCTGTTTACTACCGACGATCTCAACGAGGATATTGTG > NZ_CP009273/3971683‑3971847 | ggTTACTTTATTTTTGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAAt > 2:389848/1‑90 (MQ=255) cTTTATTTTTGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGtt > 2:66500/1‑90 (MQ=255) cTTTATTTTTGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGtt < 2:279311/90‑1 (MQ=255) tttttGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGc < 2:237126/90‑1 (MQ=255) tttttGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGc < 2:464051/90‑1 (MQ=255) tttttGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGc < 1:66500/90‑1 (MQ=255) gCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGat > 2:510918/1‑90 (MQ=255) gCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGat > 2:29828/1‑90 (MQ=255) gCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGat > 1:316846/1‑90 (MQ=255) agGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGaac < 1:29828/90‑1 (MQ=255) tACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGcc < 2:515327/90‑1 (MQ=255) tgtgCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGc < 1:354055/90‑1 (MQ=255) tgtgCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGc < 1:291549/90‑1 (MQ=255) gtgCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGaac > 1:36224/1‑74 (MQ=255) gtgCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGaac < 2:36224/74‑1 (MQ=255) ttACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGCTGttt < 1:117354/90‑1 (MQ=255) ttACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGCTGttt < 2:200476/90‑1 (MQ=255) gATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGCTGTTtactac < 1:389848/90‑1 (MQ=255) aTTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGt > 2:38722/1‑43 (MQ=255) aTTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGt < 1:38722/43‑1 (MQ=255) ggCGGGCATTCCTTGTGTGCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGCTGTTTACTACcgacga > 2:248350/1‑90 (MQ=255) gtgtgCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGc < 2:319020/60‑1 (MQ=255) gtgtgCTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGc > 1:319020/1‑60 (MQ=255) cTTAACCGGGGAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGCTGTTTACTACCGACGATCTCAACGAGGATATtgtg < 1:223673/90‑1 (MQ=255) | GGTTACTTTATTTTTGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGAAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGCTGTTTACTACCGACGATCTCAACGAGGATATTGTG > NZ_CP009273/3971683‑3971847 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |