| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,039,082 | T→C | E294G (GAA→GGA) | yihG ← | acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,039,082 | 0 | T | C | 100.0% | 66.0 / NA | 19 | E294G (GAA→GGA) | yihG | acyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (12/7); total (12/7) | |||||||||||
CTCGCCTCTGCTCATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCATGTAACTCATCGGC > NZ_CP009273/4038998‑4039164 | ctcGCCTCTGCTCATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTCCCTGc < 1:294770/90‑1 (MQ=255)ctcGCCTCTGCTCATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTCCCTGc < 1:89539/90‑1 (MQ=255) cccccTCTGCTCATTCAGAGGCGAGAAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTCCCTGcc < 2:138517/87‑1 (MQ=255) cATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGACTTTTCCCTGCCACAATGAGTTc > 2:498503/1‑90 (MQ=255) ttCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAg > 2:258585/1‑90 (MQ=255) cGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCt > 1:8082/1‑90 (MQ=255) gAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGcc > 1:122776/1‑83 (MQ=255) gAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGcc < 2:122776/83‑1 (MQ=255) tacttaTTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGgcgc > 2:272669/1‑90 (MQ=255) ttCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTccc < 1:351658/48‑1 (MQ=255) atgaCATGAGAGACGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGa < 1:285203/90‑1 (MQ=255) gagagaCGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTc < 1:386127/90‑1 (MQ=255) gagagaCGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTc > 1:471313/1‑90 (MQ=255) gagagaCGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTc > 1:302919/1‑90 (MQ=255) gagagaCGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTc > 1:254149/1‑90 (MQ=255) gagaCGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGc > 2:164651/1‑90 (MQ=255) gagaCGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGc > 1:181355/1‑90 (MQ=255) gaCGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCa < 2:181355/90‑1 (MQ=255) gaCGTCAGAAGCCGGTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCa > 2:472087/1‑90 (MQ=255) gTCTTTTCCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCATGTAACTCATCGGc > 1:425701/1‑90 (MQ=255) | CTCGCCTCTGCTCATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCATGTAACTCATCGGC > NZ_CP009273/4038998‑4039164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |