| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,221,148 | G→A | G289G (GGG→GGA) | rluF → | 23S rRNA pseudouridine(2604) synthase RluF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,221,148 | 0 | G | A | 100.0% | 50.5 / NA | 15 | G289G (GGG→GGA) | rluF | 23S rRNA pseudouridine(2604) synthase RluF |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/10); total (5/10) | |||||||||||
TGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGAAAAGGGTTAGGGTGAG > NZ_CP009273/4221069‑4221234 | tGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGATTaa < 1:140295/90‑1 (MQ=255)tGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGATTaa < 1:178608/90‑1 (MQ=255)tGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGATTaa < 1:369026/90‑1 (MQ=255)tGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGATTaa > 2:30697/1‑90 (MQ=255) aaaaCGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGATTAACGCCt < 2:392928/90‑1 (MQ=255) ggCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGATTAACGCCTCAGACTGATGAAAAc < 1:154496/90‑1 (MQ=255) tCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGccc < 2:152932/90‑1 (MQ=255) gTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGATTAACGCCTCAGAc < 1:300979/58‑1 (MQ=255) gTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGATTAACGCCTCAGAc > 2:300979/1‑58 (MQ=255) tCGCCGGGGCGTAAAAAGAAGGGACGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAg < 1:311294/75‑1 (MQ=255) tCGCCGGGGCGTAAAAAGAAGGGACGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAg > 2:311294/1‑75 (MQ=255) tCGCCGGGGCGTAAAAAGAAGGGACGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTc > 2:435628/1‑90 (MQ=255) gCCGGGGCGTAAAAAGAAGGGACGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCgg < 1:273915/90‑1 (MQ=255) gggCGTAAAAAGAAGGGACGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGaaa < 1:136715/90‑1 (MQ=255) tAAAAAGAAGGGACGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGAAAAGGGt > 1:441355/1‑90 (MQ=255) gggaCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGAAAAGGGTTAGGGTGAg < 2:510719/90‑1 (MQ=255) | TGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGATTAACGCCTCAGACTGATGAAAACGGCCCAAAAGTGCCCGGACAGTCCCCTCGCCCCTTCGGGAAAAGGGTTAGGGTGAG > NZ_CP009273/4221069‑4221234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |