| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 432,061 | G→A | T324T (ACG→ACA) R6H (CGC→CAC) |
thiL → pgpA → |
thiamine‑phosphate kinase phosphatidylglycerophosphatase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 432,061 | 0 | G | A | 100.0% | 43.6 / NA | 13 | T324T (ACG→ACA) R6H (CGC→CAC) | thiL pgpA | thiamine‑phosphate kinase phosphatidylglycerophosphatase A |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/4); total (9/4) | |||||||||||
CGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTA > NZ_CP009273/431983‑432140 | cgATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACACCATAAAGATg < 1:347621/90‑1 (MQ=255) ttGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGcc < 2:449729/90‑1 (MQ=255) ttttATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGCCTGa < 1:115392/90‑1 (MQ=255) aTTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGCCTGAAGAt > 2:362877/1‑90 (MQ=255) ttACATTAGACTGGAAAGGATATGACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTa > 1:1027/1‑90 (MQ=255) ttAGACTGGAAAGGATATGACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGc > 2:344295/1‑90 (MQ=255) tAGACTGGAAAGGATATGACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGGGGCATCTACTTGCt > 2:484848/1‑90 (MQ=255) gACTGGAAAGGATATGACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGt > 1:518424/1‑90 (MQ=255) ggAAAGGATATGACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGa > 1:16862/1‑90 (MQ=255) ggAAAGGATATGACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGa > 2:479975/1‑90 (MQ=255) tatGACCATTTTGCCCCACCATAAAGATGTCGCGAAAAGTCACCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAg < 1:228656/90‑1 (MQ=255) gACCATTTTGCCACACCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTgg > 1:76063/1‑90 (MQ=255) aTTTTGCCACACCATAAAGATGTCGCGATAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTa > 1:172652/1‑90 (MQ=255) | CGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTA > NZ_CP009273/431983‑432140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |