| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,474,928 | T→A | I281F (ATC→TTC) | pepA ← | leucyl aminopeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,474,928 | 0 | T | A | 100.0% | 68.6 / NA | 19 | I281F (ATC→TTC) | pepA | leucyl aminopeptidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (10/9); total (10/9) | |||||||||||
TCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTC > NZ_CP009273/4474853‑4475012 | tCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGAACGAGATACCGCCgg < 1:190481/90‑1 (MQ=255)tCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGAACGAGATACCGCCgg < 1:56021/90‑1 (MQ=255) tCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGa < 1:18249/90‑1 (MQ=255) ccGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGtt > 2:521196/1‑90 (MQ=255) gCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTAccc > 2:291714/1‑90 (MQ=255) gcacATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCAc > 2:95339/1‑90 (MQ=255) catctcatcCATGCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATc < 1:375375/90‑1 (MQ=255) catctcatcCATGCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATc > 1:440276/1‑90 (MQ=255) tctcatcCATGCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCtt > 2:156173/1‑90 (MQ=255) aTGCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTaa > 1:423100/1‑47 (MQ=255) aTGCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTaa < 2:423100/47‑1 (MQ=255) gCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGtt < 2:96120/90‑1 (MQ=255) gCCTTCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGtt < 1:251096/90‑1 (MQ=255) ttCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGcc > 1:479883/1‑90 (MQ=255) ttCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGcc > 2:39466/1‑90 (MQ=255) tCTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCt > 1:464041/1‑90 (MQ=255) cTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGAcgc < 2:308394/82‑1 (MQ=255) cTGAAGGCTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGAcgc > 1:308394/1‑82 (MQ=255) cTTGAACGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTc < 1:291714/90‑1 (MQ=255) | TCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTC > NZ_CP009273/4474853‑4475012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |