| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 500,101 | T→C | T18A (ACC→GCC) | fsr ← | fosmidomycin MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 500,101 | 0 | T | C | 100.0% | 20.5 / NA | 10 | T18A (ACC→GCC) | fsr | fosmidomycin MFS transporter |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (4/6); total (4/6) | |||||||||||
TCGCCAGAATCAGCGATTGGATCATGTCGTTCAGCAGATGTGAGAGGCTGATAGCACCTAAAATACCAAACGATGTTCGGGCCTTGGTCGTTGACGCAGCCGCGCCCGCCACAGGCTGGGGTTGTTCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTAAA > NZ_CP009273/500014‑500185 | tCGCCAGAATCAGCGATTGGATCATGTCGTTCAGCAGATGTGAGAGGCTGATAGCACCTAAAATACCAAACGATGTTCGGGCCTTGGCCg < 2:271108/90‑1 (MQ=255) cttGTCTTTCAGAAGATGGGAGGGGTTAAAACCACCAAAAACACAAAAGGTTGTTGGGGCTTGGGCCGTGGCCGCAGCCGCGCCCGCcac < 2:426315/88‑1 (MQ=255) tGTCGTTCAGCAGATGTGAGAGGCTGATAGCACCTAAAATACCAAACGATGTTCGGGCCTTGGCCGTTGACGCAGCCGCGCCCGCCACAg > 2:96294/1‑90 (MQ=255) tccagaagATGGGAGGGGCTAATACCACAAAAAACCCCAAAGGTTGTTGGGGCTTGGGCCGTGGCCCCGCCCCCGCCCGCCACAGGCTgg < 1:405955/88‑1 (MQ=255) aTGTGAGGGGCTGATAGCCCCAAAAATACCAAACGATGTTCGGGCTTTGGCCGTTGACGCAGCCGCGCCCGCCACAGGCTGGGGTTGTTc < 1:21722/90‑1 (MQ=255) gagaGGCTGATAGCACCTAAAATACCAAACGATGTTCGGGCCTTGGCCGTTGACGCAGCCGCGCCCGCCACAGGCTGGGGTTGTTc > 2:211732/1‑86 (MQ=255) gagaGGCTGATAGCACCAAAAATACCAAACGATGTTCGGGCCTTGGCCGTTGACGCAGCCGCGCCCGCCACAGGCTGGGGTTGTTc < 1:211732/86‑1 (MQ=255) cAAACGATGTTCGGGCCTTGGCCGTTGACGCAGCCGCGCCCGCCACAGGCTGGGGTTGTTCACTCATTGCCATAGGAAAGTCACTTTTTc > 2:441506/1‑90 (MQ=255) gggggCTTTGGCGGTTGACGCAGCCGCGCCCGCCACAGGCTGGGGTTGTTCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGa < 1:491640/88‑1 (MQ=255) cTTGGCCGTTGACGCAGCCGCGCCCGCCACAGGCTGGGGTTGTTCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTaaa > 2:73684/1‑90 (MQ=255) | TCGCCAGAATCAGCGATTGGATCATGTCGTTCAGCAGATGTGAGAGGCTGATAGCACCTAAAATACCAAACGATGTTCGGGCCTTGGTCGTTGACGCAGCCGCGCCCGCCACAGGCTGGGGTTGTTCACTCATTGCCATAGGAAAGTCACTTTTTCAGGGTTGCGATGTAAA > NZ_CP009273/500014‑500185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |