| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 551,127 | A→G | E354G (GAA→GGA) | cysS → | cysteine‑‑tRNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 551,127 | 0 | A | G | 100.0% | 62.0 / NA | 18 | E354G (GAA→GGA) | cysS | cysteine‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/9); total (9/9) | |||||||||||
GATAAAACCGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGAAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCAGAAGATATGGCAGCGGCGAATGCAATGGCAT > NZ_CP009273/551045‑551210 | gATAAAACCGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGCCTAt > 1:414080/1‑90 (MQ=255) aaCCGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGcc > 1:23702/1‑82 (MQ=255) aaCCGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGcc < 2:23702/82‑1 (MQ=255) aaCCGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGCCTATTCCGt < 1:103060/90‑1 (MQ=255) ccGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGCCTATTCCGTAc < 1:420443/90‑1 (MQ=255) ccGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGCCTATTCCGTAc < 2:207990/90‑1 (MQ=255) ccGTTGCCCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGCCTATTCCGTAc < 2:112208/90‑1 (MQ=255) ttGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGCCTATTCCGTACTGt > 1:442547/1‑90 (MQ=255) tGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGCCTATTCCGTACTGTTTGatat > 1:413913/1‑90 (MQ=255) cgcgcTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGGAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGa > 1:21546/1‑90 (MQ=255) ttGAAGCGATGGACGACGATTTCAACACCCCGGGAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCagaag < 2:413913/90‑1 (MQ=255) gCGATGGACGACGATTTCAACACCCCGGGAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCAGAAGATATg > 1:500455/1‑90 (MQ=255) tGGACGACGATTTCAACACCCCGGGAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCAGAAGATATGGCAg < 2:99447/90‑1 (MQ=255) tCAACACCCCGGGAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCAGAAGATATGGCAGCGGCGAATGCaa > 1:470895/1‑90 (MQ=255) cAACACCCCGGGAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCAGAAGATATGGCAGCGGCGAATGCAAt < 2:414080/90‑1 (MQ=255) ccccGGGAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCaga < 2:218524/61‑1 (MQ=255) ccccGGGAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCaga > 1:218524/1‑61 (MQ=255) ccccGGGAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCAGAAGATATGGCAGCGGCGAATGCAATGGCAt > 1:150487/1‑90 (MQ=255) | GATAAAACCGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGAAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCAGAAGATATGGCAGCGGCGAATGCAATGGCAT > NZ_CP009273/551045‑551210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |