| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 688,227 | A→G | L203P (CTG→CCG) | ybeZ ← | PhoH family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 688,227 | 0 | A | G | 100.0% | 68.1 / NA | 20 | L203P (CTG→CCG) | ybeZ | PhoH family protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (15/5); total (15/5) | |||||||||||
CGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTACT > NZ_CP009273/688140‑688313 | cGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGgc > 1:489949/1‑90 (MQ=255) aCGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGGCGcgtc > 1:515300/1‑90 (MQ=255) aCGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGGCGcgtc > 1:172562/1‑90 (MQ=255) aGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGgcgc > 2:497845/1‑90 (MQ=255) aGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGgcgc > 1:154087/1‑90 (MQ=255) gCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCa > 1:241267/1‑90 (MQ=255) gCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCa > 1:35752/1‑90 (MQ=255) gCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGgcg > 1:238401/1‑67 (MQ=255) gCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGgcg < 2:238401/67‑1 (MQ=255) ttGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTgg > 2:142697/1‑90 (MQ=255) gcgcTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCt > 1:303141/1‑90 (MQ=255) tttCTCGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCcagg < 2:110625/90‑1 (MQ=255) ctcGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCAGATAc < 1:491574/58‑1 (MQ=255) ctcGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCAGATAc > 2:491574/1‑58 (MQ=255) cGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGa < 2:408892/90‑1 (MQ=255) cGACTTTCTCAAAGCCCAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGa > 1:120589/1‑90 (MQ=255) cAGCATTTCAAACGGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCAcc > 2:477290/1‑90 (MQ=255) aGCATTTCAAACGGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCg > 1:426494/1‑90 (MQ=255) tCAAACGGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCt > 1:3665/1‑90 (MQ=255) aaCGGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTACt < 1:142697/90‑1 (MQ=255) | CGACCACGCATATAGGCCAGCGGTGCGACTTCAATAACGTTGCGCTCAATCAGTTTCTCGACTTTCTCAAAGCCCAGCATTTCAAACAGCGCGTCGTACAGCGGGCGCAGATACGGGTCTACTTTCTGGCTTAAATCGCCAGGCAGGAAGCCCAGTTTCTCACCGGCTTCTACT > NZ_CP009273/688140‑688313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |