| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 139,901 | T→G | G212G (GGT→GGG) | yadG → | ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 139,901 | 0 | T | G | 100.0% | 74.5 / NA | 21 | G212G (GGT→GGG) | yadG | ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (12/9); total (12/9) | |||||||||||
CAAAGGCACCACCATCATTCTCACCACACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGTGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGAAACCTTTATTCTCGATCTCGCACCGAAAAG > NZ_CP009273/139817‑139984 | cAAAGGCACCACCATCATTCTCACCACACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCt < 1:410735/90‑1 (MQ=255) aaGGCACCACCATCATTCTCACCACACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCtgg < 1:108401/90‑1 (MQ=255) atcatTCTCACCACACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATAcc < 2:20678/90‑1 (MQ=255) ctcACCACACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATg < 1:94183/90‑1 (MQ=255) caccacACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGaa > 1:160404/1‑90 (MQ=255) caccacACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGaa > 2:61634/1‑90 (MQ=255) acTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCgctgc < 1:280910/90‑1 (MQ=255) tACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGctgctg > 2:169062/1‑90 (MQ=255) ggAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGaa > 1:103126/1‑90 (MQ=255) ggAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGaa > 2:418544/1‑90 (MQ=255) gaagaaGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATAcc < 1:72468/66‑1 (MQ=255) gaagaaGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATAcc > 2:72468/1‑66 (MQ=255) gaagCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTg > 2:396349/1‑90 (MQ=255) gaagCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTg > 2:52375/1‑90 (MQ=255) agCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGaa > 2:509399/1‑90 (MQ=255) aTGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGaa < 2:40237/90‑1 (MQ=255) tGCTGTGCCGCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGaaa < 1:45495/90‑1 (MQ=255) gCAATATCGGCATTATTCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGAAACCTTTATtc > 1:445982/1‑90 (MQ=255) attattCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGAAACCTTTATTCTCGATCTCGCa > 2:254967/1‑90 (MQ=255) ttattCAACACGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGAAACCTTTATTCTCGATCTCGCAc < 1:418544/90‑1 (MQ=255) acacGGGGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGAAACCTTTATTCTCGATCTCGCACCGAAAAg > 2:19092/1‑90 (MQ=255) | CAAAGGCACCACCATCATTCTCACCACACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGTGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGAAACCTTTATTCTCGATCTCGCACCGAAAAG > NZ_CP009273/139817‑139984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |