| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,245,651 | A→G | V215A (GTC→GCC) | dhaK ← | dihydroxyacetone kinase subunit DhaK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,245,651 | 0 | A | G | 100.0% | 53.3 / NA | 16 | V215A (GTC→GCC) | dhaK | dihydroxyacetone kinase subunit DhaK |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/10); total (6/10) | |||||||||||
GGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATA > NZ_CP009273/1245571‑1245731 | gggTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGGCGCCAAACt > 1:270056/1‑90 (MQ=255) gtgtCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGGCGCCAAACTcc > 2:138534/1‑90 (MQ=255) gtCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGGCGCCAAACTCCAt > 1:153468/1‑90 (MQ=255) cGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCa < 1:250742/90‑1 (MQ=255) ggTTTGATCAAAGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGt > 1:167849/1‑90 (MQ=255) gagaAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGccc < 2:48884/90‑1 (MQ=255) cggTCAATACCCGGCTCACCATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACg < 1:322623/90‑1 (MQ=255) cggTCAATACCCGGCTCACCATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACg < 2:171899/90‑1 (MQ=255) cggTCAATACCCGGCTCACCATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACg < 2:270056/90‑1 (MQ=255) cAATACCCGGCTCACCATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTAc < 2:153468/90‑1 (MQ=255) cGGCTCACCATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCAcc > 2:183910/1‑90 (MQ=255) ggCTCACCATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCg < 2:131338/90‑1 (MQ=255) ccATGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCg < 1:463821/90‑1 (MQ=255) aTGAATGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGAt < 1:138534/90‑1 (MQ=255) aaTGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATa > 1:52881/1‑88 (MQ=255) aaTGCCGGCGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATa < 2:52881/88‑1 (MQ=255) | GGGTGTCGAACATTTCATCGACGGTTTGATCAAGGGAAGAGAAGGGGCGGCGGTCAATACCCGGCTCACCATGAATGCCGACGCCAAACTCCATCTCATTATCCGCCAGGGTAAAAGAAGGTTTGCCCGCGGCAGGAACGGTACAGGCACCGAGAGCGATA > NZ_CP009273/1245571‑1245731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |