| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,357,220 | A→G | D74G (GAC→GGC) | puuC → | aldehyde dehydrogenase PuuC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,357,220 | 0 | A | G | 100.0% | 34.4 / NA | 11 | D74G (GAC→GGC) | puuC | aldehyde dehydrogenase PuuC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (7/4); total (7/4) | |||||||||||
CCGCTGGCGAAAATTGCCCGCGGCAAGAGCGTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGACTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTACTGAATAAACTCGCCGATTTAATGGAAGCCCACGCCGAAGAGCTGGCAC > NZ_CP009273/1357138‑1357306 | ccGCTGGCGAAAATTGCCCGCGGCAAGAGCGTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGGCTGGTCa > 2:449014/1‑90 (MQ=255)ccGCTGGCGAAAATTGCCCGCGGCAAGAGCGTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGGCTGGTCa > 2:478869/1‑90 (MQ=255) gagCGTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGGCTGGTCACTCTCTTCTCCGGCTAAACGTAAAGc < 1:29434/90‑1 (MQ=255) gTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGGCTGGTCa < 1:45116/60‑1 (MQ=255) gTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGGCTGGTCa > 2:45116/1‑60 (MQ=255) gTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGGCTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTa > 1:181359/1‑90 (MQ=255) gTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGGCTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTa > 2:240267/1‑90 (MQ=255) gTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGGCTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTa > 2:483289/1‑90 (MQ=255) gCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGGCTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTACTGAATAAACTCGcc > 2:71063/1‑90 (MQ=255) tttGAACGCGGCGGCTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTACTGAATAAACTCGCCGATTTAATGGAAGCCCACGCCGaa < 1:483289/90‑1 (MQ=255) gcgGCTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTACTGAATAAACTCGCCGATTTAATGGAAGCCCACGCCGAAGAGCTGGCAc < 2:187423/90‑1 (MQ=255) | CCGCTGGCGAAAATTGCCCGCGGCAAGAGCGTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGACTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTACTGAATAAACTCGCCGATTTAATGGAAGCCCACGCCGAAGAGCTGGCAC > NZ_CP009273/1357138‑1357306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |