| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,373,311 | A→C | T391P (ACG→CCG) | ycjT → | kojibiose phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,373,311 | 0 | A | C | 100.0% | 15.0 / NA | 6 | T391P (ACG→CCG) | ycjT | kojibiose phosphorylase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (4/2); total (4/2) | |||||||||||
CAGGAGAAAGCGCGACGCAACGGCTGGCAGGGCGCGCTATTTCCGTGGGAAAGCGCGCGCAGCGGCGAAGAAGAGACGCCGGAATTTGCCGCCATTAACATTCGCACCGGGCTGCGGCAAAAAGTGGCCTCGGCGCAGGCGGAACA > NZ_CP009273/1373236‑1373381 | cAGGAGAACGCGCGACGCAACGGCTGGCAGGGCGCGCTATTTCCGTGGGAAAGCGCGCGAAGCGGCGAAGAAGAGCCGCCGGAATTTgcc < 1:321969/90‑1 (MQ=255) gTGGGAAAGCGCGCGCAGCGGCGAAGAAGAGCCGCCGGAATTTGCCGCCATTAACATTCGCACCGGGCTGCGGCAAAAAGTGGCCTCGgc > 2:489380/1‑90 (MQ=255) gggAAAGCGCGCGCAGCGGCGAAGAAGAGCCGCCGGAATTTGCCGCCATTAACATTCGCACCGGGCTGCGGCAAAAAGTGGCCTCGgcgc > 2:487134/1‑90 (MQ=255) gggAAAGCGCGCGCAGCGGCGAAGAAGAGCCCCCGGAATTTGCCGCCATTAACATTCGCACCGGGCTGCGGCAAAAAGTGGCCTCGgcgc < 2:398412/90‑1 (MQ=255) gcgcgcAGCGGCGAAGAAGAGCCGCCGGAATTTGCCGCCATTAACATTCGCACCGGGCTGCGGCAAAAAGTGGCCTCGGCGCAGGCGGaa > 1:315978/1‑90 (MQ=255) gcgcAGCGGCGAAGAAGAGCCGCCGGAATTTGCCGCCATTAACATTCGCACCGGGCTGCGGCAAAAAGTGGCCTCGGCGCAGGCGGAAca > 1:28904/1‑90 (MQ=255) | CAGGAGAAAGCGCGACGCAACGGCTGGCAGGGCGCGCTATTTCCGTGGGAAAGCGCGCGCAGCGGCGAAGAAGAGACGCCGGAATTTGCCGCCATTAACATTCGCACCGGGCTGCGGCAAAAAGTGGCCTCGGCGCAGGCGGAACA > NZ_CP009273/1373236‑1373381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |