| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,503,813 | G→T | V17F (GTT→TTT) | hicB → | type II toxin‑antitoxin system antitoxin HicB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,503,813 | 0 | G | T | 100.0% | 62.5 / NA | 17 | V17F (GTT→TTT) | hicB | type II toxin‑antitoxin system antitoxin HicB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (9/8); total (9/8) | |||||||||||
ATTAAAAAGGTTAATGACATGCGAGAGACAGTCGAAATTATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTG > NZ_CP009273/1503726‑1503896 | aTTAAAAAGGTTAATGACATGCGAGAGACAGTCGAAATTATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGttt < 2:505349/90‑1 (MQ=255) tAAAAAGGTTAATGACATGCGAGAGACAGTCGAAATTATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGTTTTc < 1:159969/90‑1 (MQ=255) tAATGACATGCGAGAGACAGTCGAAATTATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGa > 2:520276/1‑90 (MQ=255) aaTGACATGCGAGAGACAGTCGAAATTATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGat < 1:45187/90‑1 (MQ=255) agaCAGTCGAAATTATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGATATCCCTGAAGCGt < 1:520276/90‑1 (MQ=255) gTCGAAATTATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGat < 1:122630/72‑1 (MQ=255) gTCGAAATTATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGat > 2:122630/1‑72 (MQ=255) aTGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGATATCCCTGaa > 2:71289/1‑72 (MQ=255) aTGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGATATCCCTGaa < 1:71289/72‑1 (MQ=255) aTCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGGCGAAACTGTCg > 2:378834/1‑90 (MQ=255) acacCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGGCGAAACTGTCGCTGAAGCGATGGaa > 1:2477/1‑90 (MQ=255) acCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGATATCCCTGaa < 2:45701/49‑1 (MQ=255) acCCGCGCCGGAAGGCGGTTATATGTTTTCTTTTGTGGATATCCCTGaa > 1:45701/1‑49 (MQ=255) cgcgCCGGAAGGCGGTTATATGTTTTCTTTTGTGGat > 2:494110/1‑37 (MQ=255) cgcgCCGGAAGGCGGTTATATGTTTTCTTTTGTGGat < 1:494110/37‑1 (MQ=38) cgcgCCGGAAGGCGGTTATATGTTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGc > 1:94596/1‑90 (MQ=255) cgcgCCGGAAGGCGGTTATATGTTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGc > 1:63609/1‑90 (MQ=255) tataTGTTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTg < 1:8271/90‑1 (MQ=255) | ATTAAAAAGGTTAATGACATGCGAGAGACAGTCGAAATTATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTG > NZ_CP009273/1503726‑1503896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |