| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 183,254 | T→C | G628G (GGA→GGG) | glnD ← | bifunctional uridylyltransferase/uridylyl‑removing protein GlnD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 183,254 | 0 | T | C | 100.0% | 108.9 / NA | 31 | G628G (GGA→GGG) | glnD | bifunctional uridylyltransferase/uridylyl‑removing protein GlnD |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (15/16); total (15/16) | |||||||||||
TTCGTCGATGTTATCCATGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATTCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTG > NZ_CP009273/183167‑183338 | ttCGTCGATGTTATCCATGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATccc < 1:111641/90‑1 (MQ=255) cgtcgATGTTATCCATGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCcgc < 1:38981/90‑1 (MQ=255) gtcgATGTTATCCATGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCcgcg > 2:303129/1‑90 (MQ=255) gTTATCCATGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAg > 1:230773/1‑90 (MQ=255) gTTATCCATGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAg > 1:87063/1‑90 (MQ=255) tGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCTCATATCCGGCGTGTTTTGCATCCCGCGTCGTAgc < 1:168464/83‑1 (MQ=255) tGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCTCATATCCGGCGTGTTTTGCATCCCGCGTCGTAgc > 2:168464/1‑83 (MQ=255) tGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATccc < 2:376611/73‑1 (MQ=255) tGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATccc > 1:376611/1‑73 (MQ=255) tGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCtttt > 1:388571/1‑90 (MQ=255) gcgcAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTc < 2:340813/90‑1 (MQ=255) cAGTAGTGTTAGTGAATGGAGTTGGTGTGGGCGCACCCGTTCGCACAGAACCGGCGTGTTTTTCATCCCGCGGCGTAGCTGCTTTTCggg < 2:381477/90‑2 (MQ=255) gtgccagtgccTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCaa < 2:205117/90‑1 (MQ=255) gtgccagtgccTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCaa < 1:401747/90‑1 (MQ=255) agtgccTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTag > 2:486780/1‑90 (MQ=255) tgccTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTagag > 1:419252/1‑90 (MQ=255) tgccTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTagag > 2:427169/1‑90 (MQ=255) tGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAAc > 2:21808/1‑90 (MQ=255) ggCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACttt < 1:165870/90‑1 (MQ=255) aaCCCGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGGGCTCACGCAACAGACTTTGCtt > 1:157243/1‑90 (MQ=255) ccGTTCGCGCATATCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCa < 1:241896/90‑1 (MQ=255) atatCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCcac < 1:172359/90‑1 (MQ=255) tatCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCcaca > 1:124509/1‑90 (MQ=255) atCCGGCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAg < 1:303129/90‑1 (MQ=255) gCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGttt > 1:335075/1‑90 (MQ=255) gCGTGTTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGttt > 2:479970/1‑90 (MQ=255) gtTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGc > 2:341367/1‑36 (MQ=38) gtTTTGCATCCCGCGTCGTAGCTGCTTTTCGGTGGc < 1:341367/36‑1 (MQ=38) ttGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTtggt < 2:230773/90‑1 (MQ=255) ttGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTtggt < 2:322206/90‑1 (MQ=255) ttGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTtggt < 2:388571/90‑1 (MQ=255) tGCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTtggtg < 2:188843/90‑1 (MQ=255) gCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACtt > 2:37084/1‑56 (MQ=255) gCATCCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACtt < 1:37084/56‑1 (MQ=255) | TTCGTCGATGTTATCCATGCGCAGTAGTGCCAGTGCCTGGAGTTGGTGATGGCGAACCCGTTCGCGCATATCCGGCGTGTTTTGCATTCCGCGTCGTAGCTGCTTTTCGGTGGCAAAGTAGAGCTCACGCAACAGACTTTGCTTCCAGCTATTCCACAGCGTTTCGTTGGTG > NZ_CP009273/183167‑183338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |