| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,624,359 | T→C | E271G (GAA→GGA) | ydfI ← | mannitol dehydrogenase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,624,359 | 0 | T | C | 100.0% | 51.0 / NA | 15 | E271G (GAA→GGA) | ydfI | mannitol dehydrogenase family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/7); total (8/7) | |||||||||||
TGACTGCCGTTGAGCATGCGCAACTTCATCTCTTCATAAGGCAGCACATCGCTAACCAGTTCGGCTCCCGCTTTTTCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGTTCACAGGCAACGCCCGCAGGATCGCGCAC > NZ_CP009273/1624284‑1624444 | tgaCTGCCGTTGAGCATGCGCAACTTCATCTCTTCATAAGGCAGCACATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGt < 2:79580/90‑1 (MQ=255) aCTGCCGTTGAGCATGCGCAACTTCATCTCTTCATAAGGCAGCACATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTcc < 1:407131/90‑1 (MQ=255) aTGCGCAACTTCATCTCTTCATAAGGCAGCACATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTa > 1:78973/1‑90 (MQ=255) cgcAACTTCATCTCTTCATAAGGCAGCACATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTAtct < 2:203783/90‑1 (MQ=255) ggCAGCACATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGaaa < 2:78973/90‑1 (MQ=255) cagcaCATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTAtcttc < 1:151012/69‑1 (MQ=255) cagcaCATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTAtcttc > 2:151012/1‑69 (MQ=255) gcaCATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGtt > 1:521118/1‑90 (MQ=255) gcaCATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGtt > 2:180833/1‑90 (MQ=255) gcaCATCGCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGtt > 2:449087/1‑90 (MQ=255) gCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTAtc > 1:362563/1‑57 (MQ=255) gCTAACCAGTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTAtc < 2:362563/57‑1 (MQ=255) gTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGTTCACAGGCAACGCCCg > 1:381739/1‑90 (MQ=255) gTTCGGCTCCCGCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGTTCACAGGCAACGCCCg > 1:123205/1‑90 (MQ=255) gCTTTTCCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGTTCACAGGCAACGCCCGCAGGATCgcgc < 2:49057/90‑1 (MQ=255) ttttcCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGTTCACAGGCAACGCCCGCAGGATCGCGcac < 2:222032/90‑1 (MQ=255) ttttcCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGTTCACAGGCAACGCCCGCAGGATCGCGcac < 2:381739/90‑1 (MQ=255) ttttcCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGTTCACAGGCAACGCCCGCAGGATCGCGcac < 2:521118/90‑1 (MQ=255) ttttcCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGTTCACAGGCAACGCCCGCAGGATCGCGcac < 1:221503/90‑1 (MQ=255) | TGACTGCCGTTGAGCATGCGCAACTTCATCTCTTCATAAGGCAGCACATCGCTAACCAGTTCGGCTCCCGCTTTTTCCCATTCCGGACGTCCGGCAACAAAGTTATCTTCTATTACCCACTGGCGGAAAGGTTCACAGGCAACGCCCGCAGGATCGCGCAC > NZ_CP009273/1624284‑1624444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |