| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,741,262 | A→G | *102W (TGA→TGG) | ydhR → | monooxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,741,262 | 0 | A | G | 100.0% | 64.4 / NA | 19 | *102W (TGA→TGG) | ydhR | monooxygenase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (4/15); total (4/15) | |||||||||||
AAAAATCTCGGCGTTGAGGAAGTTGTCGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGACAGAATTTAATCAAGGGCGGTTAGCGCCCTTTTCATCCCTGTCTGAAATTTCTCAAATTCTAAAAATCTCAACCAAACTTAT > NZ_CP009273/1741176‑1741344 | aaaaaTCTCGGCGTTGAGGAAGTTGTCGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAg < 1:78177/90‑1 (MQ=255) aTCTCGGCGTTGAGGAAGTTGTCGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAAtt < 2:371797/90‑1 (MQ=255) aGTTGTCGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATc > 1:329456/1‑79 (MQ=255) aGTTGTCGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATc < 2:329456/79‑1 (MQ=255) tCGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGcc < 2:66214/90‑1 (MQ=255) cGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGc > 1:111077/1‑79 (MQ=255) cGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGc < 2:111077/79‑1 (MQ=255) cGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGccc < 1:117687/90‑1 (MQ=255) cGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGccc < 2:233716/90‑1 (MQ=255) cGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGccc < 2:114035/90‑1 (MQ=255) ttttCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGccc > 2:319017/1‑82 (MQ=255) ttttCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGccc < 1:319017/82‑1 (MQ=255) ttCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGCCCTTTTCATccc < 2:265440/90‑1 (MQ=255) cTTAGTCAAATCAATCAGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGCCCTTTTCATCCCTGTCTGAAATTTCTCaaa > 2:46458/1‑90 (MQ=255) caatcaGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGCCCTTTTCATCCCTGTCTGAAATTTCTCAAATTCTAAAAAtc < 1:121020/90‑1 (MQ=255) aGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGCCCTTTTCATCCCTGTCTGAAATTTCTCAAATTCTAAAAATCTCAAc < 2:151684/90‑1 (MQ=255) aGGCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGCCCTTTTCATCCCTGTCTGAAATTTCTCAAATTCTAAAAATCTCAAc < 2:476904/90‑1 (MQ=255) ggCAAAACTCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGCCCTTTTCATCCCTGTCTGAAATTTCTCAAATTCTAAAAAGCTCAAcc < 2:38098/90‑1 (MQ=255) tCGCCTGGCAGAATTTAATCAAGGGCGGTTAGCGCCCTTTTCATCCCTGTCTGAAATTTCTCAAATTCTAAAAATCTCAACCAAACTTAt < 1:46458/90‑1 (MQ=255) | AAAAATCTCGGCGTTGAGGAAGTTGTCGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGACAGAATTTAATCAAGGGCGGTTAGCGCCCTTTTCATCCCTGTCTGAAATTTCTCAAATTCTAAAAATCTCAACCAAACTTAT > NZ_CP009273/1741176‑1741344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |