Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4062689	4062701	13	2 [0]	[0] 2	yihQ/yihR	sulfoquinovosidase/aldose‑1‑epimerase

ATAGAGTTGAGAACGAGATTGTTGCCTTCCTGTTATTACAG  >  NZ_CP009273/4062648‑4062688                                         | aTAGAGTTGAGAACGAGATTGTTGCCTTCCTGTTATTACAg  >  1:541192/1‑41 (MQ=255) aTAGAGTTGAGAACGAGATTGTTGCCTTCCTGTTATTACAg  <  2:541192/41‑1 (MQ=255)                                         | ATAGAGTTGAGAACGAGATTGTTGCCTTCCTGTTATTACAG  >  NZ_CP009273/4062648‑4062688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑