Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1205052	1205052	1	2 [0]	[0] 2	BW25113_RS06005	phage tail protein

CAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA  >  NZ_CP009273/1204999‑1205051                                                     | cagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGGaa  >  1:393837/1‑53 (MQ=255) cagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACAAACAGGTaa  <  2:393837/53‑1 (MQ=255)                                                     | CAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA  >  NZ_CP009273/1204999‑1205051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑