Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1539048	1539130	83	2 [1]	[1] 2	BW25113_RS07710	leucine‑rich repeat domain‑containing protein

TAAATAACATGAGCTGCATAGTAGGGCAATTGTTCTTCCCAGAAACATTTAAAAAATTTAAGTTTTGCTCTGTTTTATTATGGGGAATAAAGTTCCAATATCGGATGTAT  >  NZ_CP009273/1538958‑1539067                                                                                          |                     tAAATAACATGAGCTGCATAGTAGGGCAATTGTTCTTCCCAGAAACATTTAAAAAATTTAAGTTTTGCTCTGTTTTATTATGGGGAATaa                      <  2:158510/90‑1 (MQ=255)                     gtagGGCAATTGTTCTTCCCAGAAACATTTAAAAAATTTAAGTTTTGCTCTGTTTTATTATGGGGAATAAAGTTCCAATATCGGATGtat  >  1:486143/1‑90 (MQ=255)                                                                                          |                     TAAATAACATGAGCTGCATAGTAGGGCAATTGTTCTTCCCAGAAACATTTAAAAAATTTAAGTTTTGCTCTGTTTTATTATGGGGAATAAAGTTCCAATATCGGATGTAT  >  NZ_CP009273/1538958‑1539067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑