Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2463818	2463873	56	2 [1]	[0] 2	BW25113_RS12270	hypothetical protein

TAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGC  >  NZ_CP009273/2463874‑2463926 |                                                     tAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGc  >  1:612201/1‑53 (MQ=255) tAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGc  <  2:612201/53‑1 (MQ=255) |                                                     TAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGC  >  NZ_CP009273/2463874‑2463926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑