Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3647067	3647077	11	4 [0]	[0] 4	BW25113_RS18165/slp	hypothetical protein/outer membrane lipoprotein Slp

GATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGC  >  NZ_CP009273/3647078‑3647138 |                                                             gATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACaa     <  1:541323/58‑1 (MQ=255) gATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACaa     >  2:541323/1‑58 (MQ=255) gATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGc  >  1:424498/1‑61 (MQ=255) gATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGc  <  2:424498/61‑1 (MQ=255) |                                                             GATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTACTTTTAAAACAATGC  >  NZ_CP009273/3647078‑3647138

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑