Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3792426	3792467	42	2 [0]	[0] 4	waaU	glycosyltransferase family 9 protein

CTTTACTATAAAGTTCACGATAAATCGAACTTAATACAATTAGATCACCAAGTTT  >  NZ_CP009273/3792468‑3792522 |                                                       cTTTACTATAAAGTTCACGATAAATCGAACTTAAt                      >  1:50262/1‑35 (MQ=255) cTTTACTATAAAGTTCACGATAAATCGAACTTAAt                      <  2:50262/35‑1 (MQ=255) cTTTACTATAAAGTTCACGATAAATCGAACTTAATACAATTAGATCACCAAGttt  >  1:607751/1‑55 (MQ=255) cTTTACTATAAAGTTCACGATAAATCGAACTTAATACAATTAGATCACCAAGttt  <  2:607751/55‑1 (MQ=255) |                                                       CTTTACTATAAAGTTCACGATAAATCGAACTTAATACAATTAGATCACCAAGTTT  >  NZ_CP009273/3792468‑3792522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑