Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3798122	3798132	11	2 [0]	[1] 2	rfaS	LPS core biosynthesis protein RfaS

TAATATCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAAACTTTATGACAGTTAATATTTTTTAAT  >  NZ_CP009273/3798131‑3798222   |                                                                                          taataTCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAAACTTTATGACAGTTAATATTTTTTa    >  2:577509/1‑90 (MQ=255)   atatCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAAACTTTATGACAGTTAATATTTTTTAat  >  1:138326/1‑90 (MQ=255)   |                                                                                          TAATATCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAAACTTTATGACAGTTAATATTTTTTAAT  >  NZ_CP009273/3798131‑3798222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑