Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1212153	1212155	3	2 [0]	[0] 2	ariR/BW25113_RS06060	biofilm/acid‑resistance regulator AriR/hypothetical protein

ACTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAA  >  NZ_CP009273/1212156‑1212239 |                                                                                    aCTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCaa  >  1:26170/1‑84 (MQ=255) aCTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCaa  <  2:26170/84‑1 (MQ=255) |                                                                                    ACTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAA  >  NZ_CP009273/1212156‑1212239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑