Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	872339	872418	80	2 [1]	[1] 2	rimO	30S ribosomal protein S12 methylthiotransferase RimO

CACCATTGAGATAAACCGCGCCGTCGATTTCCGGTGCATCTGCCATGCTGCGACCAATCGCGCCTTCTTCGTCCACTTCGTCGATAATCACCAGAATTTCACGGCCCACTTT  >  NZ_CP009273/872249‑872360                                                                                          |                       cACCATTGAGATAAACCGCGCCGTCGATTTCCGGGGCATCTGCCATGCTGCGACCAATCGCGCCGTCTTCGTCCACTTCGTCGATAATCa                        >  2:177277/1‑90 (MQ=255)                       gTCGATTTCCGGTGCATCTGCCATGCTGCGACCAATCGCGCCTTCTTCGTCCACTTCGTCGATAATCACCAGAATTTCACGGCCCACttt  <  1:174756/90‑1 (MQ=255)                                                                                          |                       CACCATTGAGATAAACCGCGCCGTCGATTTCCGGTGCATCTGCCATGCTGCGACCAATCGCGCCTTCTTCGTCCACTTCGTCGATAATCACCAGAATTTCACGGCCCACTTT  >  NZ_CP009273/872249‑872360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑