Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1028332	1028352	21	2 [0]	[1] 2	hyaA	hydrogenase 1 small subunit

TCTATGGTCAGCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGTT  >  NZ_CP009273/1028271‑1028331                                                             | tCTATGGTCAGCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGtt  >  1:15953/1‑61 (MQ=255) tCTATGGTCAGCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGtt  <  2:15953/61‑1 (MQ=255)                                                             | TCTATGGTCAGCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGTT  >  NZ_CP009273/1028271‑1028331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑