Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3354471	3354481	11	5 [1]	[0] 2	gltD/gltF	glutamate synthase subunit GltD/DUF1120 domain‑containing protein

ACATGATCGTAACTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAG  >  NZ_CP009273/3354383‑3354472                                                                                        |   acaTGATCGTAACTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAg  <  1:286221/90‑1 (MQ=255)            aCTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAAc    >  1:31067/1‑77 (MQ=255)            aCTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAAc    <  2:31067/77‑1 (MQ=255)                                           gCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAAc    <  1:243004/46‑1 (MQ=255)                                           gCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAAc    >  2:243004/1‑46 (MQ=255)                                                                                        |   ACATGATCGTAACTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAG  >  NZ_CP009273/3354383‑3354472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑