Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	579534	579551	18	3 [1]	[0] 2	appY	DNA‑binding transcriptional activator AppY

CACTCCCTTTGGTTAAAAGAAAGACTATGTATATCCTTACTTGCCATGTTCAAAAAACGCGAAAGTGTAAATTCATTTATACTAACAAAT  >  NZ_CP009273/579446‑579535                                                                                        |   cacTCCCTTTGGTTAAAAGAAAGACTATGTATATCCTTACTTGCCATGTTCAAAAAACGCGAAAGTGTAAATTCATTTATACTAACAAat  <  1:242134/90‑1 (MQ=255)                                       aCTTGCCATGTTCAAAAAACGCGAAAGTGTAAATTCATTTATACTAACaa    <  1:80162/50‑1 (MQ=255)                                       aCTTGCCATGTTCAAAAAACGCGAAAGTGTAAATTCATTTATACTAACaa    >  2:80162/1‑50 (MQ=255)                                                                                        |   CACTCCCTTTGGTTAAAAGAAAGACTATGTATATCCTTACTTGCCATGTTCAAAAAACGCGAAAGTGTAAATTCATTTATACTAACAAAT  >  NZ_CP009273/579446‑579535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑