Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	825173	825221	49	2 [1]	[1] 4	hlyD	secretion protein HlyD

GTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCAC  >  NZ_CP009273/825206‑825311                 |                                                                                          gTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTa                  >  2:210083/1‑90 (MQ=255)                 gCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCAc  <  1:210083/90‑1 (MQ=255)                 gCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCAc  <  1:254193/90‑1 (MQ=255)                 gCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCAc  <  2:115389/90‑1 (MQ=255)                 |                                                                                          GTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCAC  >  NZ_CP009273/825206‑825311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑