Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1211783	1211826	44	3 [1]	[0] 3	[ymgA]–[ariR]	[ymgA],[ariR]

GCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGAAGAAGAATC  >  NZ_CP009273/1211827‑1211916 |                                                                                          gCTTGAAGATACTACAATTCATAATGCAATAACTGATaa                                                     >  1:243596/1‑39 (MQ=255) gCTTGAAGATACTACAATTCATAATGCAATAACTGATaa                                                     <  2:243596/39‑1 (MQ=255) gCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGAAGAAGAATc  >  2:102197/1‑90 (MQ=255) |                                                                                          GCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGAAGAAGAATC  >  NZ_CP009273/1211827‑1211916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑