Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1225257	1225289	33	4 [1]	[1] 3	hlyE	hemolysin HlyE

GAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGCTGCTTTTTTCTGAA  >  NZ_CP009273/1225261‑1225374                              |                                                                                     gaatagGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGAc                          <  2:280761/90‑1 (MQ=255)                              ggCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGCTGCTTTTTTCTGaa  <  1:231083/85‑1 (MQ=255)                              ggCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGCTGCTTTTTTCTGaa  >  2:231083/1‑85 (MQ=255)                              |                                                                                     GAATAGGAAATGATTAATCCAAATGGACCGGCGACGACACCGGCTGCGGCACCGGCATATGCTTCCTTCCTGATTTTATCTACCTGTGACTGGAAATAGCTGCTTTTTTCTGAA  >  NZ_CP009273/1225261‑1225374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑