Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	397707	397727	21	2 [1]	[1] 3	phoA	alkaline phosphatase

TGCAGGATGCCACGCCCGCTGCGCTGGTGGCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTA  >  NZ_CP009273/397720‑397809         |                                                                                  tGCAGGATGCCACGCCCGCTGCGCTGGTGGCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTa  <  2:299140/90‑1 (MQ=255)         gCCACGCCCGCTGCGCTGGTGGCACATGTGACCTCGCGCAAATGCTAc                                    >  1:255643/1‑48 (MQ=255)         gCCACGCCCGCTGCGCTGGTGGCACATGTGACCTCGCGCAAATGCTAc                                    <  2:255643/48‑1 (MQ=255)         |                                                                                  TGCAGGATGCCACGCCCGCTGCGCTGGTGGCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTA  >  NZ_CP009273/397720‑397809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑