Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	586925	586935	11	2 [0]	[1] 4	nrfB	cyclic di‑3',5'‑guanylate‑activated glycosyltransferase NrfB

ATGCAGCGCCACGGAGGCCGGCATTTCGGCAATCAGCGAGGAAGGGATCTGCCAGGCATCGATGGATTCCCACGCCACGCCGTTTTGCTCTGCCA  >  NZ_CP009273/586931‑587025      |                                                                                          aTGCAGCGCCACGGAGGCCGGCATTTCGGCAATCAGCGAGGAAGGGATCTGCCAGGCATCGATGGATTCCCACGCCACGCCGTTTTGctc       >  1:179521/1‑90 (MQ=255)      gcgcCACGGAGGCCGGCATTTCGGCAATCAGCGAGGAAGGGATc                                                <  1:250068/44‑1 (MQ=255)      gcgcCACGGAGGCCGGCATTTCGGCAATCAGCGAGGAAGGGATc                                                >  2:250068/1‑44 (MQ=255)      gcgcCACGGAGGCCGGCATTTCGGCAATCAGCGAGGAAGGGATCTGCCAGGCATCGATGGATTCCCACGCCACGCCGTTTTGCTCTGCCa  >  1:278452/1‑90 (MQ=255)      |                                                                                          ATGCAGCGCCACGGAGGCCGGCATTTCGGCAATCAGCGAGGAAGGGATCTGCCAGGCATCGATGGATTCCCACGCCACGCCGTTTTGCTCTGCCA  >  NZ_CP009273/586931‑587025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑