| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 360104 = | NA (NA) | 28 (0.960) | 19/164 | 0.3 | NA | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
| ? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
GGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTC > NZ_CP009273/360200‑360375 | ggAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggg > 1:221796/1‑90 (MQ=255)ggAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggg > 2:578588/1‑90 (MQ=255) gagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggg‑aat > 2:516598/1‑90 (MQ=255) gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑aatta > 2:246397/1‑90 (MQ=255) gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑aatta > 2:149338/1‑90 (MQ=255) acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAg > 2:459769/1‑90 (MQ=255) aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGaaa < 1:246397/90‑1 (MQ=255) aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGaaa < 2:221796/90‑1 (MQ=255) aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGaaa < 2:180686/90‑1 (MQ=255) aGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAggg < 1:577912/90‑1 (MQ=255) gATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGc > 1:587945/1‑90 (MQ=255) gAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGAt < 1:149338/90‑1 (MQ=255) ggCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGc < 2:456569/90‑1 (MQ=255) ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa < 1:385608/90‑1 (MQ=255) cAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAt < 1:747563/90‑1 (MQ=255) cAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAt < 1:21315/90‑1 (MQ=255) ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat < 2:642768/90‑1 (MQ=255) ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat < 1:485965/90‑1 (MQ=255) tCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata > 2:651998/1‑90 (MQ=255) tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGtt > 1:187177/1‑90 (MQ=255) tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa < 1:713633/77‑1 (MQ=255) tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa > 2:713633/1‑77 (MQ=255) gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa < 1:568622/90‑1 (MQ=255) tttCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGAt > 2:832474/1‑64 (MQ=255) tttCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGAt < 1:832474/64‑1 (MQ=255) tttCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCa < 1:61606/90‑1 (MQ=255) ttATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAg > 2:405636/1‑90 (MQ=255) gATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg > 2:488691/1‑90 (MQ=255) gATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg < 1:418298/90‑1 (MQ=255) tGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc > 1:82931/1‑90 (MQ=255) gaattggg‑aattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGc < 1:252242/90‑1 (MQ=255) tggg‑aattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTc > 1:514825/1‑90 (MQ=255) | GGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGG‑AATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTC > NZ_CP009273/360200‑360375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |