Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1973023	1973033	11	4 [1]	[2] 3	flhD/uspC	flagellar transcriptional regulator FlhD/universal stress protein UspC

TATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTA  >  NZ_CP009273/1973025‑1973123          |                                                                                          tatTAACCACTTGTTTAATGCGGAGAATCAGTACACTAttt                                                            >  1:167467/1‑41 (MQ=255) tatTAACCACTTGTTTAATGCGGAGAATCAGTACACTAttt                                                            <  2:167467/41‑1 (MQ=255)          cTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTa  >  2:879486/1‑90 (MQ=255)          |                                                                                          TATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTA  >  NZ_CP009273/1973025‑1973123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑