Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3354473	3354481	9	5 [0]	[0] 2	gltD/gltF	glutamate synthase subunit GltD/DUF1120 domain‑containing protein

ACATGATCGTAACTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAG  >  NZ_CP009273/3354383‑3354472                                                                                          | acaTGATCGTAACTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAg  <  1:565622/90‑1 (MQ=255) acaTGATCGTAACTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAg  <  2:227862/90‑1 (MQ=255) acaTGATCGTAACTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAg  <  2:56409/90‑1 (MQ=255)                taAAATTCATTAAATAAATACAACCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAg  <  1:412724/75‑1 (MQ=255)                taAAATTCATTAAATAAATACAACCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAg  >  2:412724/1‑75 (MQ=255)                                                                                          | ACATGATCGTAACTATAAAATTCATTAAATAAATACATCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAG  >  NZ_CP009273/3354383‑3354472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑