Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2987451	2987527	77	2 [1]	[1] 2	BW25113_RS14845	lytic transglycosylase domain‑containing protein

TCTTTCGCCAGCAACTCTTGCTCTAATGAAGCAGGAACAATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATA  >  NZ_CP009273/2987361‑2987487                                                                                          |                                      tCTTTCGCCAGCAACTCTTGCTCTAATGAAGCAGGAACAATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGc                                       <  1:204927/90‑1 (MQ=255)                                      cAATGTTAAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATa  <  2:398914/90‑1 (MQ=255)                                                                                          |                                      TCTTTCGCCAGCAACTCTTGCTCTAATGAAGCAGGAACAATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATA  >  NZ_CP009273/2987361‑2987487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑