Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	825312	825324	13	3 [1]	[1] 3	hlyD	secretion protein HlyD

GCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTG  >  NZ_CP009273/825222‑825315                                                                                          |     gCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCAc      <  1:172862/90‑1 (MQ=255) gCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCAc      <  1:312654/90‑1 (MQ=255)     gCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCCCCGCGCCCCCCAACACGGCAACTAAGAACTACCGGACGCCTACCCACGtcc  >  2:361874/1‑88 (MQ=255)                                                                                          |     GCCCGCTTTGATAGCATCACCTTCGTCCACCGCCAGCGATTCAACGCGCCCCCCAACACGGAAACTAAGATTTACCGTACGAATATCCACGTTG  >  NZ_CP009273/825222‑825315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑