Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1098636	1098639	4	2 [0]	[0] 2	csgD	biofilm master transcriptional regulator CsgD

CTGCAAGAGAGCTGTCGCCTGCAAAGAAGATTTAGTGATCAACAATAATGTATGACCATGAATACTA  >  NZ_CP009273/1098569‑1098635                                                                   | ctgcAAGAGAGCTGTCGCCTGCAAAGAAGATTTAGTGATCAACAATAATGTATGACCATGAATACTa  >  1:281848/1‑67 (MQ=255) ctgcAAGAGAGCTGTCGCCTGCAAAGAAGATTTAGTGATCAACAATAATGTATGACCATGAATACTa  <  2:281848/67‑1 (MQ=255)                                                                   | CTGCAAGAGAGCTGTCGCCTGCAAAGAAGATTTAGTGATCAACAATAATGTATGACCATGAATACTA  >  NZ_CP009273/1098569‑1098635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑