Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1116493	1116503	11	7 [0]	[1] 3	bssS/dinI	biofilm formation regulator BssS/DNA damage‑inducible protein I

TTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAA  >  NZ_CP009273/1116403‑1116492                                                                                          | tttttCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa  <  1:184668/90‑1 (MQ=255) tttttCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa  <  1:354976/90‑1 (MQ=255) tttttCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa  <  2:173308/90‑1 (MQ=255)                                                 aGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa  <  1:248196/42‑1 (MQ=255)                                                 aGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa  >  2:248196/1‑42 (MQ=255)                                                      cAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa  >  1:67666/1‑37 (MQ=255)                                                      cAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa  <  2:67666/37‑1 (MQ=255)                                                                                          | TTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAA  >  NZ_CP009273/1116403‑1116492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑